Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 MIR346-201ENST00000362234 95 ntBASIC14.4□□□□□ -0.1
NR1H2P55055 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
NR1H2P55055 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.4□□□□□ -0.1
NR1H2P55055 AL390955.2-201ENST00000603032 514 ntBASIC14.4□□□□□ -0.1
NR1H2P55055 AL158211.3-201ENST00000607385 239 ntBASIC14.4□□□□□ -0.1
NR1H2P55055 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.4□□□□□ -0.1
NR1H2P55055 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.4□□□□□ -0.1
NR1H2P55055 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NR1H2P55055 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.4□□□□□ -0.1
NR1H2P55055 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NR1H2P55055 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 AC015818.8-201ENST00000587907 1519 ntBASIC14.4□□□□□ -0.1
NR1H2P55055 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
NR1H2P55055 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.39□□□□□ -0.11
NR1H2P55055 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.39□□□□□ -0.11
NR1H2P55055 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.39□□□□□ -0.11
NR1H2P55055 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.39□□□□□ -0.11
NR1H2P55055 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.39□□□□□ -0.11
NR1H2P55055 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.39□□□□□ -0.11
NR1H2P55055 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 IGHV3-42-201ENST00000520410 361 ntBASIC14.39□□□□□ -0.11
NR1H2P55055 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.39□□□□□ -0.11
NR1H2P55055 AC069120.2-201ENST00000524091 540 ntBASIC14.39□□□□□ -0.11
NR1H2P55055 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.39□□□□□ -0.11
NR1H2P55055 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.39□□□□□ -0.11
NR1H2P55055 MIR4313-201ENST00000580760 101 ntBASIC14.39□□□□□ -0.11
NR1H2P55055 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.39□□□□□ -0.11
NR1H2P55055 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.39□□□□□ -0.11
NR1H2P55055 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.39□□□□□ -0.11
NR1H2P55055 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NR1H2P55055 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NR1H2P55055 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.39□□□□□ -0.11
NR1H2P55055 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NR1H2P55055 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NR1H2P55055 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR1H2P55055 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms