Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.51■□□□□ 0.07
ITGA8P53708 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.51■□□□□ 0.07
ITGA8P53708 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ITGA8P53708 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.51■□□□□ 0.07
ITGA8P53708 PMS2P2-201ENST00000425039 1128 ntBASIC15.51■□□□□ 0.07
ITGA8P53708 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.51■□□□□ 0.07
ITGA8P53708 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
ITGA8P53708 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.51■□□□□ 0.07
ITGA8P53708 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ITGA8P53708 AC109322.1-201ENST00000524499 1264 ntBASIC15.51■□□□□ 0.07
ITGA8P53708 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.51■□□□□ 0.07
ITGA8P53708 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.51■□□□□ 0.07
ITGA8P53708 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.51■□□□□ 0.07
ITGA8P53708 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.51■□□□□ 0.07
ITGA8P53708 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.51■□□□□ 0.07
ITGA8P53708 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.51■□□□□ 0.07
ITGA8P53708 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.51■□□□□ 0.07
ITGA8P53708 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ITGA8P53708 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.51■□□□□ 0.07
ITGA8P53708 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.51■□□□□ 0.07
ITGA8P53708 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.51■□□□□ 0.07
ITGA8P53708 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
ITGA8P53708 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.51■□□□□ 0.07
ITGA8P53708 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.51■□□□□ 0.07
ITGA8P53708 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ITGA8P53708 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.5■□□□□ 0.07
ITGA8P53708 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ITGA8P53708 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ITGA8P53708 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
ITGA8P53708 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 AGGF1P1-201ENST00000509500 2073 ntBASIC15.5■□□□□ 0.07
ITGA8P53708 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.5■□□□□ 0.07
ITGA8P53708 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.5■□□□□ 0.07
ITGA8P53708 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.5■□□□□ 0.07
ITGA8P53708 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.5■□□□□ 0.07
ITGA8P53708 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.5■□□□□ 0.07
ITGA8P53708 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.5■□□□□ 0.07
ITGA8P53708 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ITGA8P53708 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ITGA8P53708 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.5■□□□□ 0.07
ITGA8P53708 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ITGA8P53708 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.5■□□□□ 0.07
ITGA8P53708 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.5■□□□□ 0.07
ITGA8P53708 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.5■□□□□ 0.07
ITGA8P53708 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.5■□□□□ 0.07
ITGA8P53708 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.5■□□□□ 0.07
ITGA8P53708 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.5■□□□□ 0.07
ITGA8P53708 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.5■□□□□ 0.07
ITGA8P53708 AL158212.4-201ENST00000624062 1286 ntBASIC15.5■□□□□ 0.07
ITGA8P53708 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.5■□□□□ 0.07
ITGA8P53708 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.5■□□□□ 0.07
ITGA8P53708 AL359881.3-201ENST00000602640 1721 ntBASIC15.5■□□□□ 0.07
ITGA8P53708 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 MBLAC2-202ENST00000514906 1936 ntBASIC15.5■□□□□ 0.07
ITGA8P53708 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.5■□□□□ 0.07
ITGA8P53708 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ITGA8P53708 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.5■□□□□ 0.07
ITGA8P53708 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ITGA8P53708 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ITGA8P53708 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ITGA8P53708 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.49■□□□□ 0.07
ITGA8P53708 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ITGA8P53708 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
ITGA8P53708 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
ITGA8P53708 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ITGA8P53708 TUBB3P1-201ENST00000405796 1332 ntBASIC15.49■□□□□ 0.07
ITGA8P53708 KRT18P28-201ENST00000453838 1332 ntBASIC15.49■□□□□ 0.07
ITGA8P53708 AC093525.8-201ENST00000624099 1342 ntBASIC15.49■□□□□ 0.07
ITGA8P53708 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ITGA8P53708 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ITGA8P53708 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms