Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 AL627231.1-201ENST00000394467 1125 ntBASIC16.56■□□□□ 0.24
CDK7P50613 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 POU5F1P2-201ENST00000521750 823 ntBASIC16.56■□□□□ 0.24
CDK7P50613 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
CDK7P50613 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CDK7P50613 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CDK7P50613 AC135983.4-201ENST00000564116 1262 ntBASIC16.56■□□□□ 0.24
CDK7P50613 AL603832.2-201ENST00000566195 2125 ntBASIC16.56■□□□□ 0.24
CDK7P50613 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CDK7P50613 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CDK7P50613 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 AC051619.9-201ENST00000623237 597 ntBASIC16.56■□□□□ 0.24
CDK7P50613 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.56■□□□□ 0.24
CDK7P50613 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CDK7P50613 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 MBLAC2-202ENST00000514906 1936 ntBASIC16.56■□□□□ 0.24
CDK7P50613 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDK7P50613 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.56■□□□□ 0.24
CDK7P50613 DBET-201ENST00000630918 3363 ntBASIC16.56■□□□□ 0.24
CDK7P50613 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDK7P50613 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDK7P50613 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDK7P50613 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.56■□□□□ 0.24
CDK7P50613 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.55■□□□□ 0.24
CDK7P50613 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CDK7P50613 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 AC239868.1-201ENST00000369385 493 ntBASIC16.55■□□□□ 0.24
CDK7P50613 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.55■□□□□ 0.24
CDK7P50613 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.55■□□□□ 0.24
CDK7P50613 AC078991.1-201ENST00000437297 610 ntBASIC16.55■□□□□ 0.24
CDK7P50613 RN7SL258P-201ENST00000478664 300 ntBASIC16.55■□□□□ 0.24
CDK7P50613 SCARNA21-201ENST00000517026 139 ntBASIC16.55■□□□□ 0.24
CDK7P50613 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.55■□□□□ 0.24
CDK7P50613 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.55■□□□□ 0.24
CDK7P50613 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 AC008805.1-201ENST00000590892 364 ntBASIC16.55■□□□□ 0.24
CDK7P50613 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.55■□□□□ 0.24
CDK7P50613 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 AC103810.10-201ENST00000606504 343 ntBASIC16.55■□□□□ 0.24
CDK7P50613 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 Z98259.2-201ENST00000641583 609 ntBASIC16.55■□□□□ 0.24
CDK7P50613 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDK7P50613 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDK7P50613 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDK7P50613 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDK7P50613 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms