Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDX1P47902 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDX1P47902 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDX1P47902 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
CDX1P47902 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CDX1P47902 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDX1P47902 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDX1P47902 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDX1P47902 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CDX1P47902 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.43□□□□□ -0.42
CDX1P47902 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDX1P47902 NUTM2HP-201ENST00000442076 2498 ntBASIC12.43□□□□□ -0.42
CDX1P47902 BX640514.1-201ENST00000583223 1918 ntBASIC12.43□□□□□ -0.42
CDX1P47902 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.42□□□□□ -0.42
CDX1P47902 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CDX1P47902 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
CDX1P47902 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 AC092135.3-201ENST00000624151 1846 ntBASIC12.42□□□□□ -0.42
CDX1P47902 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CDX1P47902 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 AL035633.1-201ENST00000406139 838 ntBASIC12.42□□□□□ -0.42
CDX1P47902 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.42□□□□□ -0.42
CDX1P47902 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 AC135586.1-201ENST00000539323 574 ntBASIC12.42□□□□□ -0.42
CDX1P47902 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.42□□□□□ -0.42
CDX1P47902 AC027307.3-201ENST00000594262 1100 ntBASIC12.42□□□□□ -0.42
CDX1P47902 AC008738.7-201ENST00000609744 511 ntBASIC12.42□□□□□ -0.42
CDX1P47902 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.42□□□□□ -0.42
CDX1P47902 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
CDX1P47902 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
CDX1P47902 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.42□□□□□ -0.42
CDX1P47902 CICP11-201ENST00000434745 2827 ntBASIC12.42□□□□□ -0.42
CDX1P47902 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CDX1P47902 AC131902.2-201ENST00000566892 2172 ntBASIC12.42□□□□□ -0.42
CDX1P47902 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDX1P47902 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.41□□□□□ -0.42
CDX1P47902 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDX1P47902 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.41□□□□□ -0.42
CDX1P47902 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDX1P47902 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.41□□□□□ -0.42
CDX1P47902 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CDX1P47902 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.41□□□□□ -0.42
CDX1P47902 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDX1P47902 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDX1P47902 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.41□□□□□ -0.42
CDX1P47902 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.41□□□□□ -0.42
CDX1P47902 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDX1P47902 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.41□□□□□ -0.42
CDX1P47902 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDX1P47902 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.41□□□□□ -0.42
CDX1P47902 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDX1P47902 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDX1P47902 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CDX1P47902 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.41□□□□□ -0.42
CDX1P47902 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.41□□□□□ -0.42
CDX1P47902 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CDX1P47902 AC114501.2-201ENST00000439631 535 ntBASIC12.41□□□□□ -0.42
CDX1P47902 EEF1DP4-201ENST00000446006 880 ntBASIC12.41□□□□□ -0.42
CDX1P47902 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.41□□□□□ -0.42
CDX1P47902 SPTLC1P1-201ENST00000447199 261 ntBASIC12.41□□□□□ -0.42
CDX1P47902 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.41□□□□□ -0.42
CDX1P47902 KRT8P37-201ENST00000451609 1420 ntBASIC12.41□□□□□ -0.42
CDX1P47902 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.41□□□□□ -0.42
CDX1P47902 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDX1P47902 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms