Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AC092117.1-201ENST00000621230 3250 ntBASIC13.08□□□□□ -0.31
CBX5P45973 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CBX5P45973 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CBX5P45973 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CBX5P45973 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CBX5P45973 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
CBX5P45973 AC136759.1-202ENST00000530858 2194 ntBASIC13.08□□□□□ -0.31
CBX5P45973 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.08□□□□□ -0.31
CBX5P45973 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CBX5P45973 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CBX5P45973 BX324167.2-201ENST00000623717 3316 ntBASIC13.08□□□□□ -0.31
CBX5P45973 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.08□□□□□ -0.32
CBX5P45973 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
CBX5P45973 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 AC004870.1-201ENST00000315132 882 ntBASIC13.08□□□□□ -0.32
CBX5P45973 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 MIR346-201ENST00000362234 95 ntBASIC13.08□□□□□ -0.32
CBX5P45973 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 FO393414.2-201ENST00000405153 598 ntBASIC13.08□□□□□ -0.32
CBX5P45973 AL355306.1-201ENST00000415580 579 ntBASIC13.08□□□□□ -0.32
CBX5P45973 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.08□□□□□ -0.32
CBX5P45973 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.08□□□□□ -0.32
CBX5P45973 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.08□□□□□ -0.32
CBX5P45973 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 KRT8P23-201ENST00000560090 1207 ntBASIC13.08□□□□□ -0.32
CBX5P45973 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.08□□□□□ -0.32
CBX5P45973 AP000842.3-202ENST00000569238 1080 ntBASIC13.08□□□□□ -0.32
CBX5P45973 AP001005.1-201ENST00000571755 1248 ntBASIC13.08□□□□□ -0.32
CBX5P45973 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.08□□□□□ -0.32
CBX5P45973 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 OR2I1P-208ENST00000641137 4948 ntBASIC13.08□□□□□ -0.32
CBX5P45973 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.08□□□□□ -0.32
CBX5P45973 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CBX5P45973 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 AL359881.3-201ENST00000602640 1721 ntBASIC13.08□□□□□ -0.32
CBX5P45973 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CBX5P45973 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.07□□□□□ -0.32
CBX5P45973 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CBX5P45973 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CBX5P45973 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.07□□□□□ -0.32
CBX5P45973 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.07□□□□□ -0.32
CBX5P45973 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
CBX5P45973 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CBX5P45973 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
CBX5P45973 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.07□□□□□ -0.32
CBX5P45973 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CBX5P45973 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms