Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.15■□□□□ 0.18
SSR1P43307 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.15■□□□□ 0.18
SSR1P43307 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 REXO1L4P-201ENST00000605109 1937 ntBASIC16.15■□□□□ 0.18
SSR1P43307 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.15■□□□□ 0.18
SSR1P43307 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SSR1P43307 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SSR1P43307 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.14■□□□□ 0.18
SSR1P43307 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SSR1P43307 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.14■□□□□ 0.17
SSR1P43307 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SSR1P43307 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SSR1P43307 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SSR1P43307 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 AC055876.3-201ENST00000431496 288 ntBASIC16.14■□□□□ 0.17
SSR1P43307 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.14■□□□□ 0.17
SSR1P43307 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.14■□□□□ 0.17
SSR1P43307 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.14■□□□□ 0.17
SSR1P43307 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.14■□□□□ 0.17
SSR1P43307 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.14■□□□□ 0.17
SSR1P43307 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.14■□□□□ 0.17
SSR1P43307 AC138649.4-201ENST00000612222 287 ntBASIC16.14■□□□□ 0.17
SSR1P43307 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SSR1P43307 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.14■□□□□ 0.17
SSR1P43307 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SSR1P43307 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.14■□□□□ 0.17
SSR1P43307 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.14■□□□□ 0.17
SSR1P43307 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SSR1P43307 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SSR1P43307 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SSR1P43307 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSR1P43307 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSR1P43307 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 LINC00552-201ENST00000625151 2579 ntBASIC16.13■□□□□ 0.17
SSR1P43307 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR1P43307 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
SSR1P43307 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.13■□□□□ 0.17
SSR1P43307 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR1P43307 TSSK5P-201ENST00000423978 907 ntBASIC16.13■□□□□ 0.17
SSR1P43307 AC114501.2-201ENST00000439631 535 ntBASIC16.13■□□□□ 0.17
SSR1P43307 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.13■□□□□ 0.17
SSR1P43307 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 MEIS3P1-201ENST00000495167 958 ntBASIC16.13■□□□□ 0.17
SSR1P43307 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SSR1P43307 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR1P43307 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SSR1P43307 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR1P43307 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSR1P43307 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR1P43307 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms