Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.29■□□□□ 0.04
RPA3P35244 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RPA3P35244 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.29■□□□□ 0.04
RPA3P35244 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPA3P35244 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPA3P35244 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.29■□□□□ 0.04
RPA3P35244 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RPA3P35244 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.29■□□□□ 0.04
RPA3P35244 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPA3P35244 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPA3P35244 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.29■□□□□ 0.04
RPA3P35244 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPA3P35244 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RPA3P35244 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 Z97205.2-201ENST00000564697 1639 ntBASIC15.28■□□□□ 0.04
RPA3P35244 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 CICP17-201ENST00000418553 2377 ntBASIC15.28■□□□□ 0.04
RPA3P35244 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.28■□□□□ 0.04
RPA3P35244 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.28■□□□□ 0.04
RPA3P35244 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.28■□□□□ 0.04
RPA3P35244 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.28■□□□□ 0.04
RPA3P35244 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
RPA3P35244 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RPA3P35244 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RPA3P35244 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.28■□□□□ 0.04
RPA3P35244 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RPA3P35244 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.28■□□□□ 0.04
RPA3P35244 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.28■□□□□ 0.04
RPA3P35244 KRT18P64-201ENST00000434946 1219 ntBASIC15.28■□□□□ 0.04
RPA3P35244 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.28■□□□□ 0.04
RPA3P35244 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.28■□□□□ 0.04
RPA3P35244 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.28■□□□□ 0.04
RPA3P35244 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
RPA3P35244 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.28■□□□□ 0.04
RPA3P35244 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 AC055811.4-201ENST00000624039 1754 ntBASIC15.28■□□□□ 0.04
RPA3P35244 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPA3P35244 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RPA3P35244 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.27■□□□□ 0.04
RPA3P35244 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.27■□□□□ 0.04
RPA3P35244 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.27■□□□□ 0.04
RPA3P35244 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 LILRP1-201ENST00000444199 1370 ntBASIC15.27■□□□□ 0.04
RPA3P35244 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.27■□□□□ 0.04
RPA3P35244 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RPA3P35244 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
RPA3P35244 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.27■□□□□ 0.04
RPA3P35244 SLED1-202ENST00000512051 380 ntBASIC15.27■□□□□ 0.04
RPA3P35244 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPA3P35244 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.27■□□□□ 0.04
RPA3P35244 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.27■□□□□ 0.04
RPA3P35244 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.27■□□□□ 0.04
RPA3P35244 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.27■□□□□ 0.04
RPA3P35244 AC135586.1-201ENST00000539323 574 ntBASIC15.27■□□□□ 0.04
RPA3P35244 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RPA3P35244 AC009407.1-201ENST00000568958 598 ntBASIC15.27■□□□□ 0.04
RPA3P35244 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.27■□□□□ 0.04
RPA3P35244 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.27■□□□□ 0.04
RPA3P35244 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.27■□□□□ 0.04
RPA3P35244 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms