Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.43□□□□□ -0.26
HOXC12P31275 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.43□□□□□ -0.26
HOXC12P31275 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.43□□□□□ -0.26
HOXC12P31275 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.43□□□□□ -0.26
HOXC12P31275 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.43□□□□□ -0.26
HOXC12P31275 AC012441.1-201ENST00000446669 685 ntBASIC13.43□□□□□ -0.26
HOXC12P31275 AC114812.1-204ENST00000449669 728 ntBASIC13.43□□□□□ -0.26
HOXC12P31275 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.43□□□□□ -0.26
HOXC12P31275 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.43□□□□□ -0.26
HOXC12P31275 ZNF767P-206ENST00000513792 565 ntBASIC13.43□□□□□ -0.26
HOXC12P31275 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.43□□□□□ -0.26
HOXC12P31275 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.43□□□□□ -0.26
HOXC12P31275 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.43□□□□□ -0.26
HOXC12P31275 CLUHP6-201ENST00000580789 941 ntBASIC13.43□□□□□ -0.26
HOXC12P31275 RN7SL190P-201ENST00000582519 257 ntBASIC13.43□□□□□ -0.26
HOXC12P31275 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.43□□□□□ -0.26
HOXC12P31275 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.43□□□□□ -0.26
HOXC12P31275 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 FP325330.2-201ENST00000624219 5630 ntBASIC13.43□□□□□ -0.26
HOXC12P31275 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.43□□□□□ -0.26
HOXC12P31275 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 AC145098.2-201ENST00000623593 3026 ntBASIC13.43□□□□□ -0.26
HOXC12P31275 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.43□□□□□ -0.26
HOXC12P31275 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.43□□□□□ -0.26
HOXC12P31275 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
HOXC12P31275 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.43□□□□□ -0.26
HOXC12P31275 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HOXC12P31275 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.42□□□□□ -0.26
HOXC12P31275 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HOXC12P31275 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HOXC12P31275 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HOXC12P31275 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HOXC12P31275 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HOXC12P31275 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HOXC12P31275 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.42□□□□□ -0.26
HOXC12P31275 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.42□□□□□ -0.26
HOXC12P31275 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HOXC12P31275 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HOXC12P31275 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.42□□□□□ -0.26
HOXC12P31275 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.42□□□□□ -0.26
HOXC12P31275 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.42□□□□□ -0.26
HOXC12P31275 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
HOXC12P31275 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HOXC12P31275 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.42□□□□□ -0.26
HOXC12P31275 AC022137.2-201ENST00000503482 481 ntBASIC13.42□□□□□ -0.26
HOXC12P31275 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.42□□□□□ -0.26
HOXC12P31275 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.42□□□□□ -0.26
HOXC12P31275 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.42□□□□□ -0.26
HOXC12P31275 C2orf69P2-201ENST00000562032 1123 ntBASIC13.42□□□□□ -0.26
HOXC12P31275 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HOXC12P31275 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.42□□□□□ -0.26
HOXC12P31275 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms