Protein–RNA interactions for Protein: P28562

DUSP1, Dual specificity protein phosphatase 1, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP1P28562 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DUSP1P28562 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.95□□□□□ -0.34
DUSP1P28562 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUSP1P28562 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUSP1P28562 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUSP1P28562 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUSP1P28562 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUSP1P28562 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
DUSP1P28562 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
DUSP1P28562 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUSP1P28562 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUSP1P28562 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUSP1P28562 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.94□□□□□ -0.34
DUSP1P28562 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 AL157414.3-201ENST00000624276 1954 ntBASIC12.94□□□□□ -0.34
DUSP1P28562 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 MTHFR-210ENST00000641407 2387 ntBASIC12.94□□□□□ -0.34
DUSP1P28562 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DUSP1P28562 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.94□□□□□ -0.34
DUSP1P28562 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
DUSP1P28562 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.94□□□□□ -0.34
DUSP1P28562 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
DUSP1P28562 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
DUSP1P28562 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
DUSP1P28562 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.94□□□□□ -0.34
DUSP1P28562 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.94□□□□□ -0.34
DUSP1P28562 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.94□□□□□ -0.34
DUSP1P28562 BASP1P1-201ENST00000430708 665 ntBASIC12.94□□□□□ -0.34
DUSP1P28562 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.94□□□□□ -0.34
DUSP1P28562 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.94□□□□□ -0.34
DUSP1P28562 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 SAMD11P1-201ENST00000571429 661 ntBASIC12.94□□□□□ -0.34
DUSP1P28562 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 AC011467.4-201ENST00000594891 528 ntBASIC12.94□□□□□ -0.34
DUSP1P28562 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.94□□□□□ -0.34
DUSP1P28562 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.94□□□□□ -0.34
DUSP1P28562 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.94□□□□□ -0.34
DUSP1P28562 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.94□□□□□ -0.34
DUSP1P28562 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.94□□□□□ -0.34
DUSP1P28562 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.94□□□□□ -0.34
DUSP1P28562 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.94□□□□□ -0.34
DUSP1P28562 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
DUSP1P28562 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
DUSP1P28562 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUSP1P28562 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUSP1P28562 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUSP1P28562 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUSP1P28562 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUSP1P28562 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
DUSP1P28562 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUSP1P28562 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUSP1P28562 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUSP1P28562 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.93□□□□□ -0.34
DUSP1P28562 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms