Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
KRT4P19013 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
KRT4P19013 FDX1P1-201ENST00000449115 551 ntBASIC15.18■□□□□ 0.02
KRT4P19013 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
KRT4P19013 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.18■□□□□ 0.02
KRT4P19013 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
KRT4P19013 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.18■□□□□ 0.02
KRT4P19013 AL513210.1-201ENST00000629608 234 ntBASIC15.18■□□□□ 0.02
KRT4P19013 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 AGGF1P1-201ENST00000509500 2073 ntBASIC15.18■□□□□ 0.02
KRT4P19013 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KRT4P19013 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KRT4P19013 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KRT4P19013 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
KRT4P19013 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT4P19013 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
KRT4P19013 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KRT4P19013 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT4P19013 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
KRT4P19013 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 CETN4P-206ENST00000642099 2168 ntBASIC15.17■□□□□ 0.02
KRT4P19013 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
KRT4P19013 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
KRT4P19013 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KRT4P19013 AC004461.1-201ENST00000412461 403 ntBASIC15.17■□□□□ 0.02
KRT4P19013 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT4P19013 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.17■□□□□ 0.02
KRT4P19013 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT4P19013 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT4P19013 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
KRT4P19013 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.17■□□□□ 0.02
KRT4P19013 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT4P19013 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT4P19013 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
KRT4P19013 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT4P19013 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT4P19013 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.16■□□□□ 0.02
KRT4P19013 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
KRT4P19013 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT4P19013 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT4P19013 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms