Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
THRAP10827 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
THRAP10827 AC015656.1-201ENST00000624209 3578 ntBASIC15.2■□□□□ 0.02
THRAP10827 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 AC022210.1-201ENST00000449856 793 ntBASIC15.2■□□□□ 0.02
THRAP10827 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.2■□□□□ 0.02
THRAP10827 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.2■□□□□ 0.02
THRAP10827 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
THRAP10827 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.2■□□□□ 0.02
THRAP10827 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.2■□□□□ 0.02
THRAP10827 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.2■□□□□ 0.02
THRAP10827 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
THRAP10827 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.2■□□□□ 0.02
THRAP10827 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
THRAP10827 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.2■□□□□ 0.02
THRAP10827 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
THRAP10827 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.2■□□□□ 0.02
THRAP10827 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THRAP10827 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.19■□□□□ 0.02
THRAP10827 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.19■□□□□ 0.02
THRAP10827 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.19■□□□□ 0.02
THRAP10827 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
THRAP10827 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.19■□□□□ 0.02
THRAP10827 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
THRAP10827 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 MIR658-201ENST00000385210 100 ntBASIC15.19■□□□□ 0.02
THRAP10827 TOMM22P5-201ENST00000416399 439 ntBASIC15.19■□□□□ 0.02
THRAP10827 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.19■□□□□ 0.02
THRAP10827 AC234783.1-201ENST00000441761 496 ntBASIC15.19■□□□□ 0.02
THRAP10827 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.19■□□□□ 0.02
THRAP10827 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.19■□□□□ 0.02
THRAP10827 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.19■□□□□ 0.02
THRAP10827 SLED1-202ENST00000512051 380 ntBASIC15.19■□□□□ 0.02
THRAP10827 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.19■□□□□ 0.02
THRAP10827 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.19■□□□□ 0.02
THRAP10827 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
THRAP10827 AL450472.2-201ENST00000603663 1156 ntBASIC15.19■□□□□ 0.02
THRAP10827 AL512343.1-201ENST00000605837 169 ntBASIC15.19■□□□□ 0.02
THRAP10827 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
THRAP10827 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.19■□□□□ 0.02
THRAP10827 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
THRAP10827 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.19■□□□□ 0.02
THRAP10827 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.19■□□□□ 0.02
THRAP10827 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THRAP10827 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.19■□□□□ 0.02
THRAP10827 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.18■□□□□ 0.02
THRAP10827 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.18■□□□□ 0.02
THRAP10827 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
THRAP10827 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
THRAP10827 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms