Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 BTBD7P1-201ENST00000447253 1453 ntBASIC15.45■□□□□ 0.06
MT-ND3P03897 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND3P03897 REXO1L4P-201ENST00000605109 1937 ntBASIC15.45■□□□□ 0.06
MT-ND3P03897 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
MT-ND3P03897 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.44■□□□□ 0.06
MT-ND3P03897 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
MT-ND3P03897 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.44■□□□□ 0.06
MT-ND3P03897 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
MT-ND3P03897 AC136759.1-202ENST00000530858 2194 ntBASIC15.44■□□□□ 0.06
MT-ND3P03897 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.44■□□□□ 0.06
MT-ND3P03897 RPL37AP1-201ENST00000412502 279 ntBASIC15.44■□□□□ 0.06
MT-ND3P03897 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.44■□□□□ 0.06
MT-ND3P03897 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 GAPDHP21-201ENST00000450301 1010 ntBASIC15.44■□□□□ 0.06
MT-ND3P03897 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 CR383656.12-201ENST00000549567 513 ntBASIC15.44■□□□□ 0.06
MT-ND3P03897 BANF1P1-201ENST00000553684 263 ntBASIC15.44■□□□□ 0.06
MT-ND3P03897 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 AL662799.1-202ENST00000614205 422 ntBASIC15.44■□□□□ 0.06
MT-ND3P03897 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.44■□□□□ 0.06
MT-ND3P03897 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.44■□□□□ 0.06
MT-ND3P03897 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND3P03897 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND3P03897 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.43■□□□□ 0.06
MT-ND3P03897 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.43■□□□□ 0.06
MT-ND3P03897 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.43■□□□□ 0.06
MT-ND3P03897 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
MT-ND3P03897 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.43■□□□□ 0.06
MT-ND3P03897 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 ZNF890P-202ENST00000530367 1156 ntBASIC15.43■□□□□ 0.06
MT-ND3P03897 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.43■□□□□ 0.06
MT-ND3P03897 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.43■□□□□ 0.06
MT-ND3P03897 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.43■□□□□ 0.06
MT-ND3P03897 SPDYE22P-201ENST00000582158 798 ntBASIC15.43■□□□□ 0.06
MT-ND3P03897 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND3P03897 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms