Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LTN1O94822 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LTN1O94822 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
LTN1O94822 KRT17P5-201ENST00000332088 839 ntBASIC19.39■□□□□ 0.7
LTN1O94822 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.39■□□□□ 0.7
LTN1O94822 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC19.39■□□□□ 0.7
LTN1O94822 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
LTN1O94822 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
LTN1O94822 AC007952.4-201ENST00000573866 637 ntBASIC19.39■□□□□ 0.7
LTN1O94822 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 AC009560.1-201ENST00000620208 434 ntBASIC19.39■□□□□ 0.7
LTN1O94822 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
LTN1O94822 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LTN1O94822 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.39■□□□□ 0.69
LTN1O94822 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.39■□□□□ 0.69
LTN1O94822 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC19.39■□□□□ 0.69
LTN1O94822 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 ERP29P1-201ENST00000442902 706 ntBASIC19.39■□□□□ 0.69
LTN1O94822 LYPLA2P1-203ENST00000447689 696 ntBASIC19.39■□□□□ 0.69
LTN1O94822 DUX4L50-201ENST00000455245 715 ntBASIC19.39■□□□□ 0.69
LTN1O94822 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
LTN1O94822 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.39■□□□□ 0.69
LTN1O94822 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTN1O94822 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.38■□□□□ 0.69
LTN1O94822 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
LTN1O94822 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC19.38■□□□□ 0.69
LTN1O94822 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.38■□□□□ 0.69
LTN1O94822 SCARNA12-201ENST00000459155 270 ntBASIC19.38■□□□□ 0.69
LTN1O94822 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC19.38■□□□□ 0.69
LTN1O94822 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC19.38■□□□□ 0.69
LTN1O94822 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.38■□□□□ 0.69
LTN1O94822 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC19.38■□□□□ 0.69
LTN1O94822 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.38■□□□□ 0.69
LTN1O94822 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LTN1O94822 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LTN1O94822 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC19.38■□□□□ 0.69
LTN1O94822 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LTN1O94822 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.38■□□□□ 0.69
LTN1O94822 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.37■□□□□ 0.69
LTN1O94822 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC19.37■□□□□ 0.69
LTN1O94822 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.37■□□□□ 0.69
LTN1O94822 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC19.37■□□□□ 0.69
LTN1O94822 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.37■□□□□ 0.69
LTN1O94822 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LTN1O94822 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.37■□□□□ 0.69
LTN1O94822 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LTN1O94822 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms