Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
GADD45BO75293 KRT8P24-201ENST00000560290 1559 ntBASIC17.24■□□□□ 0.35
GADD45BO75293 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GADD45BO75293 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.24■□□□□ 0.35
GADD45BO75293 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.24■□□□□ 0.35
GADD45BO75293 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.24■□□□□ 0.35
GADD45BO75293 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.24■□□□□ 0.35
GADD45BO75293 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.24■□□□□ 0.35
GADD45BO75293 DNAJB3-201ENST00000446806 729 ntBASIC17.24■□□□□ 0.35
GADD45BO75293 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
GADD45BO75293 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.24■□□□□ 0.35
GADD45BO75293 AC109322.1-201ENST00000524499 1264 ntBASIC17.24■□□□□ 0.35
GADD45BO75293 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GADD45BO75293 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.24■□□□□ 0.35
GADD45BO75293 AC027612.4-201ENST00000605371 583 ntBASIC17.24■□□□□ 0.35
GADD45BO75293 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.24■□□□□ 0.35
GADD45BO75293 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.24■□□□□ 0.35
GADD45BO75293 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GADD45BO75293 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.24■□□□□ 0.35
GADD45BO75293 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GADD45BO75293 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.24■□□□□ 0.35
GADD45BO75293 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GADD45BO75293 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
GADD45BO75293 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GADD45BO75293 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GADD45BO75293 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GADD45BO75293 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.23■□□□□ 0.35
GADD45BO75293 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 RPSAP43-201ENST00000402237 625 ntBASIC17.23■□□□□ 0.35
GADD45BO75293 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.23■□□□□ 0.35
GADD45BO75293 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GADD45BO75293 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.23■□□□□ 0.35
GADD45BO75293 AL589987.1-201ENST00000453380 819 ntBASIC17.23■□□□□ 0.35
GADD45BO75293 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.23■□□□□ 0.35
GADD45BO75293 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.23■□□□□ 0.35
GADD45BO75293 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
GADD45BO75293 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.23■□□□□ 0.35
GADD45BO75293 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GADD45BO75293 AL844908.2-201ENST00000609461 460 ntBASIC17.23■□□□□ 0.35
GADD45BO75293 AL391069.4-201ENST00000609583 481 ntBASIC17.23■□□□□ 0.35
GADD45BO75293 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.23■□□□□ 0.35
GADD45BO75293 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.23■□□□□ 0.35
GADD45BO75293 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.23■□□□□ 0.35
GADD45BO75293 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
GADD45BO75293 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GADD45BO75293 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GADD45BO75293 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
GADD45BO75293 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GADD45BO75293 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GADD45BO75293 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GADD45BO75293 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GADD45BO75293 PPT1-213ENST00000641319 2388 ntBASIC17.22■□□□□ 0.35
GADD45BO75293 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GADD45BO75293 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GADD45BO75293 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
GADD45BO75293 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GADD45BO75293 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.22■□□□□ 0.35
GADD45BO75293 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
GADD45BO75293 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms