Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PEX1O43933 AC027612.1-201ENST00000445234 2395 ntBASIC14.81□□□□□ -0.04
PEX1O43933 MTHFR-210ENST00000641407 2387 ntBASIC14.81□□□□□ -0.04
PEX1O43933 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PEX1O43933 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PEX1O43933 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 SERBP1P5-201ENST00000510079 1181 ntBASIC14.81□□□□□ -0.04
PEX1O43933 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.81□□□□□ -0.04
PEX1O43933 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.81□□□□□ -0.04
PEX1O43933 AC009118.2-201ENST00000613275 655 ntBASIC14.81□□□□□ -0.04
PEX1O43933 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.81□□□□□ -0.04
PEX1O43933 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 CICP8-201ENST00000455800 2813 ntBASIC14.81□□□□□ -0.04
PEX1O43933 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
PEX1O43933 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.81□□□□□ -0.04
PEX1O43933 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.81□□□□□ -0.04
PEX1O43933 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.81□□□□□ -0.04
PEX1O43933 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.81□□□□□ -0.04
PEX1O43933 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PEX1O43933 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PEX1O43933 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.8□□□□□ -0.04
PEX1O43933 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.8□□□□□ -0.04
PEX1O43933 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 COL6A4P2-202ENST00000504443 2753 ntBASIC14.8□□□□□ -0.04
PEX1O43933 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PEX1O43933 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 AC089987.1-201ENST00000551654 2209 ntBASIC14.8□□□□□ -0.04
PEX1O43933 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.8□□□□□ -0.04
PEX1O43933 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PEX1O43933 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.8□□□□□ -0.04
PEX1O43933 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.8□□□□□ -0.04
PEX1O43933 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PEX1O43933 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.79□□□□□ -0.04
PEX1O43933 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PEX1O43933 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.79□□□□□ -0.04
PEX1O43933 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.79□□□□□ -0.04
PEX1O43933 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PEX1O43933 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.79□□□□□ -0.04
PEX1O43933 AL080243.2-201ENST00000418783 582 ntBASIC14.79□□□□□ -0.04
PEX1O43933 AC009477.1-201ENST00000452936 217 ntBASIC14.79□□□□□ -0.04
PEX1O43933 MST1P2-201ENST00000457982 2291 ntBASIC14.79□□□□□ -0.04
PEX1O43933 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PEX1O43933 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.79□□□□□ -0.04
PEX1O43933 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.79□□□□□ -0.04
PEX1O43933 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms