Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM235A6NFC5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 AL354702.1-201ENST00000442006 1960 ntBASIC12.93□□□□□ -0.34
TMEM235A6NFC5 Z97205.2-201ENST00000564697 1639 ntBASIC12.93□□□□□ -0.34
TMEM235A6NFC5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 AL590627.1-203ENST00000421194 1026 ntBASIC12.93□□□□□ -0.34
TMEM235A6NFC5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 AC005237.2-201ENST00000434368 219 ntBASIC12.93□□□□□ -0.34
TMEM235A6NFC5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 AL121723.1-201ENST00000445194 1519 ntBASIC12.93□□□□□ -0.34
TMEM235A6NFC5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM235A6NFC5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM235A6NFC5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM235A6NFC5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TMEM235A6NFC5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM235A6NFC5 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM235A6NFC5 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM235A6NFC5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM235A6NFC5 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM235A6NFC5 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.92□□□□□ -0.34
TMEM235A6NFC5 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM235A6NFC5 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM235A6NFC5 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms