Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 SPDYE17-201ENST00000412399 783 ntBASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 ADH5P3-201ENST00000433842 1137 ntBASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 CICP20-201ENST00000443330 2801 ntBASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 AL354702.1-201ENST00000442006 1960 ntBASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV18A0A075B6X5 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 TIMM8BP1-201ENST00000452384 211 ntBASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 RNA5SP416-201ENST00000516838 111 ntBASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms