Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC006504.5-208ENST00000588784 2401 ntBASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDHGA11Q9Y5H2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 AC087499.6-201ENST00000411576 835 ntBASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 AL442647.2-201ENST00000429864 857 ntBASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 UGT1A2P-201ENST00000454886 866 ntBASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA11Q9Y5H2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 FAM207CP-201ENST00000443486 507 ntBASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGA11Q9Y5H2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms