Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AL136309.1-201ENST00000403917 691 ntBASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 NDUFAB1P1-201ENST00000404262 460 ntBASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AC099548.2-209ENST00000480264 625 ntBASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 NCK2-206ENST00000522586 490 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 NOP2-211ENST00000540228 668 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AC104982.3-201ENST00000581995 514 ntBASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AL022328.3-201ENST00000607943 679 ntBASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AC005695.3-201ENST00000614522 232 ntBASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AL096828.3-201ENST00000615354 462 ntBASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 MIR6787-201ENST00000616675 61 ntBASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 AC138035.3-201ENST00000622706 2791 ntBASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 AC004945.1-201ENST00000416738 983 ntBASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 AC006033.1-201ENST00000440505 426 ntBASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 CHMP1AP1-201ENST00000445563 662 ntBASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 HSPB1P2-201ENST00000448722 546 ntBASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 HIST2H2BB-201ENST00000449108 381 ntBASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 AC244093.1-201ENST00000610837 814 ntBASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 AP000593.2-201ENST00000542775 1433 ntBASIC10.31□□□□□ -0.76
LINC00588Q9Y4M8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms