Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 AC005912.2-201ENST00000619492 2400 ntBASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 INTS4P1-203ENST00000641008 3683 ntBASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 MRPS18AP1-201ENST00000414458 589 ntBASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 HLA-K-203ENST00000430151 1046 ntBASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 BRI3BPP1-201ENST00000594224 787 ntBASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 AC007431.3-201ENST00000623221 587 ntBASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NEUROD4Q9HD90 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 SPDYE19P-201ENST00000338590 713 ntBASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 NME2P1-201ENST00000426182 414 ntBASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 RN7SL692P-201ENST00000464677 288 ntBASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 SERBP1P5-201ENST00000510079 1181 ntBASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AC104596.2-201ENST00000512793 793 ntBASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AL596325.1-201ENST00000563991 1082 ntBASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 AC004790.1-201ENST00000612686 536 ntBASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NEUROD4Q9HD90 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms