Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 DMBT1P1-203ENST00000636837 4628 ntBASIC13□□□□□ -0.33
CMSS1Q9BQ75 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 AC018529.2-202ENST00000611482 3087 ntBASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 PGAM5P1-201ENST00000518923 814 ntBASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 AC005829.1-201ENST00000570002 483 ntBASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 AL645728.2-202ENST00000641679 227 ntBASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 REXO1L4P-201ENST00000605109 1937 ntBASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 AC131212.3-201ENST00000624087 4219 ntBASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CMSS1Q9BQ75 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 BX640514.1-201ENST00000583223 1918 ntBASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms