Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PTPN18Q99952 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.94■□□□□ 0.3
PTPN18Q99952 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.94■□□□□ 0.3
PTPN18Q99952 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN18Q99952 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.94■□□□□ 0.3
PTPN18Q99952 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN18Q99952 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN18Q99952 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN18Q99952 EIF5AP2-201ENST00000585668 1047 ntBASIC16.94■□□□□ 0.3
PTPN18Q99952 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN18Q99952 AL451007.2-201ENST00000632004 563 ntBASIC16.94■□□□□ 0.3
PTPN18Q99952 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
PTPN18Q99952 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN18Q99952 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN18Q99952 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN18Q99952 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PTPN18Q99952 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN18Q99952 AC092850.2-201ENST00000623821 2697 ntBASIC16.93■□□□□ 0.3
PTPN18Q99952 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PTPN18Q99952 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PTPN18Q99952 GCSHP3-201ENST00000431120 391 ntBASIC16.93■□□□□ 0.3
PTPN18Q99952 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.93■□□□□ 0.3
PTPN18Q99952 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN18Q99952 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN18Q99952 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN18Q99952 AC012158.2-201ENST00000536546 354 ntBASIC16.93■□□□□ 0.3
PTPN18Q99952 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.93■□□□□ 0.3
PTPN18Q99952 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN18Q99952 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PTPN18Q99952 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PTPN18Q99952 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PTPN18Q99952 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN18Q99952 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN18Q99952 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN18Q99952 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN18Q99952 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
PTPN18Q99952 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN18Q99952 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PTPN18Q99952 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PTPN18Q99952 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN18Q99952 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN18Q99952 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN18Q99952 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN18Q99952 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN18Q99952 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN18Q99952 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN18Q99952 RN7SL530P-201ENST00000485097 298 ntBASIC16.92■□□□□ 0.3
PTPN18Q99952 HERC2P11-201ENST00000562845 725 ntBASIC16.92■□□□□ 0.3
PTPN18Q99952 AC100756.2-201ENST00000569537 736 ntBASIC16.92■□□□□ 0.3
PTPN18Q99952 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN18Q99952 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN18Q99952 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN18Q99952 MIR4472-1-201ENST00000584349 80 ntBASIC16.92■□□□□ 0.3
PTPN18Q99952 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN18Q99952 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN18Q99952 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN18Q99952 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PTPN18Q99952 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN18Q99952 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN18Q99952 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN18Q99952 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN18Q99952 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN18Q99952 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms