Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 METTL26-205ENST00000397666 726 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.03□□□□□ -0.8
LITAFQ99732 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.03□□□□□ -0.8
LITAFQ99732 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.03□□□□□ -0.8
LITAFQ99732 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC10.03□□□□□ -0.8
LITAFQ99732 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.03□□□□□ -0.8
LITAFQ99732 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.03□□□□□ -0.8
LITAFQ99732 MIR497HG-202ENST00000572453 3838 ntBASIC10.03□□□□□ -0.8
LITAFQ99732 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC10.03□□□□□ -0.8
LITAFQ99732 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 AC007064.4-201ENST00000637740 555 ntBASIC10.03□□□□□ -0.8
LITAFQ99732 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 HSPA8P5-201ENST00000456928 2069 ntBASIC10.03□□□□□ -0.8
LITAFQ99732 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC10.03□□□□□ -0.8
LITAFQ99732 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC10.03□□□□□ -0.8
LITAFQ99732 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LITAFQ99732 AL157996.1-201ENST00000624684 2299 ntBASIC10.03□□□□□ -0.8
LITAFQ99732 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
LITAFQ99732 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
LITAFQ99732 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
LITAFQ99732 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.02□□□□□ -0.8
LITAFQ99732 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.02□□□□□ -0.8
LITAFQ99732 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LITAFQ99732 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LITAFQ99732 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LITAFQ99732 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC10.02□□□□□ -0.8
LITAFQ99732 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LITAFQ99732 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LITAFQ99732 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
LITAFQ99732 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC10.02□□□□□ -0.81
LITAFQ99732 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
LITAFQ99732 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.02□□□□□ -0.81
LITAFQ99732 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LITAFQ99732 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.02□□□□□ -0.81
LITAFQ99732 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
LITAFQ99732 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 HLA-H-201ENST00000383620 1096 ntBASIC10.02□□□□□ -0.81
LITAFQ99732 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.02□□□□□ -0.81
LITAFQ99732 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC10.02□□□□□ -0.81
LITAFQ99732 MYADML-201ENST00000474610 2147 ntBASIC10.02□□□□□ -0.81
LITAFQ99732 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.02□□□□□ -0.81
LITAFQ99732 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.02□□□□□ -0.81
LITAFQ99732 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms