Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 MIR943-201ENST00000401286 94 ntBASIC11.07□□□□□ -0.64
MUC4Q99102 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.07□□□□□ -0.64
MUC4Q99102 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.07□□□□□ -0.64
MUC4Q99102 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
MUC4Q99102 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.07□□□□□ -0.64
MUC4Q99102 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.07□□□□□ -0.64
MUC4Q99102 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 AC025181.2-201ENST00000606994 802 ntBASIC11.07□□□□□ -0.64
MUC4Q99102 AC074044.1-201ENST00000609673 707 ntBASIC11.07□□□□□ -0.64
MUC4Q99102 AC008738.7-201ENST00000609744 511 ntBASIC11.07□□□□□ -0.64
MUC4Q99102 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
MUC4Q99102 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
MUC4Q99102 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
MUC4Q99102 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
MUC4Q99102 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.07□□□□□ -0.64
MUC4Q99102 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.07□□□□□ -0.64
MUC4Q99102 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MUC4Q99102 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.06□□□□□ -0.64
MUC4Q99102 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
MUC4Q99102 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.06□□□□□ -0.64
MUC4Q99102 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.06□□□□□ -0.64
MUC4Q99102 KRT17P7-201ENST00000451704 1104 ntBASIC11.06□□□□□ -0.64
MUC4Q99102 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
MUC4Q99102 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.06□□□□□ -0.64
MUC4Q99102 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.06□□□□□ -0.64
MUC4Q99102 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.06□□□□□ -0.64
MUC4Q99102 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.06□□□□□ -0.64
MUC4Q99102 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
MUC4Q99102 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.06□□□□□ -0.64
MUC4Q99102 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
MUC4Q99102 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.06□□□□□ -0.64
MUC4Q99102 AC000095.1-201ENST00000603208 874 ntBASIC11.06□□□□□ -0.64
MUC4Q99102 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
MUC4Q99102 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 AC023090.2-201ENST00000625182 2110 ntBASIC11.06□□□□□ -0.64
MUC4Q99102 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.06□□□□□ -0.64
MUC4Q99102 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.06□□□□□ -0.64
MUC4Q99102 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MUC4Q99102 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.06□□□□□ -0.64
MUC4Q99102 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MUC4Q99102 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.06□□□□□ -0.64
MUC4Q99102 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms