Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 AL354702.1-201ENST00000442006 1960 ntBASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 CR383656.2-201ENST00000548656 2254 ntBASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.27■□□□□ 0.03
CHMP6Q96FZ7 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 FOXO1B-201ENST00000504678 1527 ntBASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHMP6Q96FZ7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 AC090505.1-201ENST00000430515 1834 ntBASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms