Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM11Q96F44 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM11Q96F44 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 AC123567.1-201ENST00000548294 1261 ntBASIC15.98■□□□□ 0.15
TRIM11Q96F44 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 TMEM261P1-201ENST00000604899 340 ntBASIC15.98■□□□□ 0.15
TRIM11Q96F44 MIR8072-201ENST00000614241 80 ntBASIC15.98■□□□□ 0.15
TRIM11Q96F44 AC008761.3-201ENST00000624803 892 ntBASIC15.98■□□□□ 0.15
TRIM11Q96F44 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.98■□□□□ 0.15
TRIM11Q96F44 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM11Q96F44 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM11Q96F44 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 RNU1-114P-201ENST00000365297 166 ntBASIC15.97■□□□□ 0.15
TRIM11Q96F44 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 AC133539.2-201ENST00000604757 467 ntBASIC15.97■□□□□ 0.15
TRIM11Q96F44 AJ011932.1-201ENST00000621707 465 ntBASIC15.97■□□□□ 0.15
TRIM11Q96F44 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM11Q96F44 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRIM11Q96F44 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms