Protein–RNA interactions for Protein: Q8N9B4

ANKRD42, Ankyrin repeat domain-containing protein 42, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42Q8N9B4 HIST3H2BA-201ENST00000436555 524 ntBASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 TP73-211ENST00000604074 4806 ntTSL 5 BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 AL359183.1-201ENST00000623796 2132 ntBASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ANKRD42Q8N9B4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 AC104109.2-201ENST00000602919 1418 ntBASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 IGHV3-62-201ENST00000520057 340 ntBASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 AC243562.1-201ENST00000560672 389 ntBASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 AP001005.1-201ENST00000571755 1248 ntBASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 AC025181.2-201ENST00000606994 802 ntBASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 AC092865.6-201ENST00000642101 219 ntBASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ANKRD42Q8N9B4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 PPT1-213ENST00000641319 2388 ntBASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 AC004899.2-201ENST00000622993 3860 ntBASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 RN7SL589P-201ENST00000481268 310 ntBASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 RNA5SP419-201ENST00000515908 135 ntBASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 AC091812.2-201ENST00000619081 385 ntBASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 TCAF1P1-201ENST00000414990 2232 ntBASIC15.28■□□□□ 0.04
ANKRD42Q8N9B4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms