Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 AL137783.1-201ENST00000623494 1896 ntBASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 LINC01230-201ENST00000625222 3017 ntBASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00346Q8IVM7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 AL353779.1-201ENST00000434793 351 ntBASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 AC026410.3-201ENST00000514280 936 ntBASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 AL662799.1-202ENST00000614205 422 ntBASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LINC00346Q8IVM7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 AC093525.8-201ENST00000624099 1342 ntBASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 HLA-K-203ENST00000430151 1046 ntBASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 UGT1A2P-201ENST00000454886 866 ntBASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00346Q8IVM7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.4□□□□□ -0.27
LINC00346Q8IVM7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms