Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RTTNQ86VV8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RTTNQ86VV8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTTNQ86VV8 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.42□□□□□ -0.26
RTTNQ86VV8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
RTTNQ86VV8 AC131212.3-201ENST00000624087 4219 ntBASIC13.42□□□□□ -0.26
RTTNQ86VV8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTTNQ86VV8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTTNQ86VV8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTTNQ86VV8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTTNQ86VV8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RTTNQ86VV8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 FXNP2-201ENST00000411625 547 ntBASIC13.41□□□□□ -0.26
RTTNQ86VV8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 MIR8072-201ENST00000614241 80 ntBASIC13.41□□□□□ -0.26
RTTNQ86VV8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 MEP1AP4-201ENST00000423244 1087 ntBASIC13.41□□□□□ -0.26
RTTNQ86VV8 VDAC1P7-201ENST00000462417 847 ntBASIC13.41□□□□□ -0.26
RTTNQ86VV8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 CICP23-201ENST00000605013 2741 ntBASIC13.41□□□□□ -0.26
RTTNQ86VV8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTTNQ86VV8 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RTTNQ86VV8 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTTNQ86VV8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTTNQ86VV8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RTTNQ86VV8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RTTNQ86VV8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 AC011495.1-201ENST00000498085 584 ntBASIC13.4□□□□□ -0.26
RTTNQ86VV8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RTTNQ86VV8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 SAMD11P1-201ENST00000571429 661 ntBASIC13.4□□□□□ -0.26
RTTNQ86VV8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.4□□□□□ -0.26
RTTNQ86VV8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTTNQ86VV8 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.4□□□□□ -0.26
RTTNQ86VV8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms