Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCNA1P78396 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17■□□□□ 0.31
CCNA1P78396 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17■□□□□ 0.31
CCNA1P78396 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCNA1P78396 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17■□□□□ 0.31
CCNA1P78396 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CCNA1P78396 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 AL627231.1-201ENST00000394467 1125 ntBASIC17■□□□□ 0.31
CCNA1P78396 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCNA1P78396 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17■□□□□ 0.31
CCNA1P78396 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17■□□□□ 0.31
CCNA1P78396 CICP12-201ENST00000455801 843 ntBASIC17■□□□□ 0.31
CCNA1P78396 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 AC008723.1-201ENST00000506922 207 ntBASIC17■□□□□ 0.31
CCNA1P78396 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 RN7SL555P-201ENST00000584742 339 ntBASIC17■□□□□ 0.31
CCNA1P78396 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17■□□□□ 0.31
CCNA1P78396 AC103810.10-201ENST00000606504 343 ntBASIC17■□□□□ 0.31
CCNA1P78396 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17■□□□□ 0.31
CCNA1P78396 AP003419.4-201ENST00000616071 517 ntBASIC17■□□□□ 0.31
CCNA1P78396 AC011491.1-203ENST00000637688 543 ntBASIC17■□□□□ 0.31
CCNA1P78396 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 LINC02199-201ENST00000506655 2702 ntBASIC17■□□□□ 0.31
CCNA1P78396 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17■□□□□ 0.31
CCNA1P78396 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 FAM90A2P-201ENST00000511144 1395 ntBASIC17■□□□□ 0.31
CCNA1P78396 FAM90A25P-201ENST00000528404 1395 ntBASIC17■□□□□ 0.31
CCNA1P78396 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCNA1P78396 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CCNA1P78396 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.99■□□□□ 0.31
CCNA1P78396 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.99■□□□□ 0.31
CCNA1P78396 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.99■□□□□ 0.31
CCNA1P78396 AL157407.1-201ENST00000435784 904 ntBASIC16.99■□□□□ 0.31
CCNA1P78396 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.99■□□□□ 0.31
CCNA1P78396 RN7SL181P-201ENST00000462921 277 ntBASIC16.99■□□□□ 0.31
CCNA1P78396 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.99■□□□□ 0.31
CCNA1P78396 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.99■□□□□ 0.31
CCNA1P78396 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.99■□□□□ 0.31
CCNA1P78396 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CCNA1P78396 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.99■□□□□ 0.31
CCNA1P78396 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.99■□□□□ 0.31
CCNA1P78396 MIR4750-201ENST00000584564 56 ntBASIC16.99■□□□□ 0.31
CCNA1P78396 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.99■□□□□ 0.31
CCNA1P78396 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.99■□□□□ 0.31
CCNA1P78396 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CCNA1P78396 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCNA1P78396 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.99■□□□□ 0.31
CCNA1P78396 AC008894.3-201ENST00000624324 3103 ntBASIC16.99■□□□□ 0.31
CCNA1P78396 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.99■□□□□ 0.31
CCNA1P78396 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCNA1P78396 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.99■□□□□ 0.31
CCNA1P78396 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.99■□□□□ 0.31
CCNA1P78396 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCNA1P78396 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCNA1P78396 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms