Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AL158070.2-201ENST00000623713 1621 ntBASIC15.29■□□□□ 0.04
PRAMEP78395 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEP78395 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 AC007541.1-201ENST00000570282 1469 ntBASIC15.29■□□□□ 0.04
PRAMEP78395 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 AL391825.1-201ENST00000457671 1364 ntBASIC15.29■□□□□ 0.04
PRAMEP78395 AC093525.8-201ENST00000624099 1342 ntBASIC15.29■□□□□ 0.04
PRAMEP78395 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEP78395 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
PRAMEP78395 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEP78395 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PRAMEP78395 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEP78395 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEP78395 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEP78395 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEP78395 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEP78395 AL132655.2-201ENST00000596276 594 ntBASIC15.29■□□□□ 0.04
PRAMEP78395 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEP78395 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEP78395 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEP78395 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PRAMEP78395 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEP78395 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEP78395 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEP78395 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEP78395 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEP78395 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEP78395 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 AL645937.2-201ENST00000396808 931 ntBASIC15.28■□□□□ 0.04
PRAMEP78395 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEP78395 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEP78395 AC087499.6-201ENST00000411576 835 ntBASIC15.28■□□□□ 0.04
PRAMEP78395 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEP78395 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEP78395 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEP78395 FAM207CP-201ENST00000443486 507 ntBASIC15.28■□□□□ 0.04
PRAMEP78395 AC123567.1-201ENST00000548294 1261 ntBASIC15.28■□□□□ 0.04
PRAMEP78395 AC120045.2-201ENST00000567334 178 ntBASIC15.28■□□□□ 0.04
PRAMEP78395 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEP78395 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEP78395 AC007431.3-201ENST00000623221 587 ntBASIC15.28■□□□□ 0.04
PRAMEP78395 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEP78395 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEP78395 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEP78395 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PRAMEP78395 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEP78395 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEP78395 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms