Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARCN1P48444 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.12■□□□□ 0.01
ARCN1P48444 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARCN1P48444 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARCN1P48444 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARCN1P48444 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
ARCN1P48444 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.11■□□□□ 0.01
ARCN1P48444 NORAD-201ENST00000565493 5339 ntBASIC15.11■□□□□ 0.01
ARCN1P48444 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.11■□□□□ 0.01
ARCN1P48444 CU639417.3-201ENST00000624240 1404 ntBASIC15.11■□□□□ 0.01
ARCN1P48444 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
ARCN1P48444 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.11■□□□□ 0.01
ARCN1P48444 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.11■□□□□ 0.01
ARCN1P48444 KLF2P2-201ENST00000416807 1039 ntBASIC15.11■□□□□ 0.01
ARCN1P48444 SOCS2P1-201ENST00000417727 557 ntBASIC15.11■□□□□ 0.01
ARCN1P48444 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.11■□□□□ 0.01
ARCN1P48444 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.11■□□□□ 0.01
ARCN1P48444 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.11■□□□□ 0.01
ARCN1P48444 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ARCN1P48444 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ARCN1P48444 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.11■□□□□ 0.01
ARCN1P48444 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.11■□□□□ 0.01
ARCN1P48444 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ARCN1P48444 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.11■□□□□ 0.01
ARCN1P48444 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.11■□□□□ 0.01
ARCN1P48444 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
ARCN1P48444 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.11■□□□□ 0.01
ARCN1P48444 AC005252.2-201ENST00000624630 1141 ntBASIC15.11■□□□□ 0.01
ARCN1P48444 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.11■□□□□ 0.01
ARCN1P48444 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ARCN1P48444 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
ARCN1P48444 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ARCN1P48444 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.11■□□□□ 0.01
ARCN1P48444 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.11■□□□□ 0.01
ARCN1P48444 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ARCN1P48444 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARCN1P48444 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ARCN1P48444 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.1■□□□□ 0.01
ARCN1P48444 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.1■□□□□ 0.01
ARCN1P48444 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ARCN1P48444 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ARCN1P48444 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.1■□□□□ 0.01
ARCN1P48444 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.1■□□□□ 0.01
ARCN1P48444 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.1■□□□□ 0.01
ARCN1P48444 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ARCN1P48444 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.1■□□□□ 0.01
ARCN1P48444 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ARCN1P48444 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ARCN1P48444 AL512384.1-201ENST00000406683 331 ntBASIC15.1■□□□□ 0.01
ARCN1P48444 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 EIF3FP3-201ENST00000434851 1086 ntBASIC15.1■□□□□ 0.01
ARCN1P48444 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.1■□□□□ 0.01
ARCN1P48444 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
ARCN1P48444 RN7SL837P-201ENST00000463010 287 ntBASIC15.1■□□□□ 0.01
ARCN1P48444 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 AC026434.2-201ENST00000506094 1078 ntBASIC15.1■□□□□ 0.01
ARCN1P48444 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
ARCN1P48444 AC022616.1-201ENST00000518688 554 ntBASIC15.1■□□□□ 0.01
ARCN1P48444 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 CR383656.12-201ENST00000549567 513 ntBASIC15.1■□□□□ 0.01
ARCN1P48444 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ARCN1P48444 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ARCN1P48444 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 INTS4P1-203ENST00000641008 3683 ntBASIC15.1■□□□□ 0.01
ARCN1P48444 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ARCN1P48444 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ARCN1P48444 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms