Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP8P40818 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
USP8P40818 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
USP8P40818 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 INTS4P1-203ENST00000641008 3683 ntBASIC16.54■□□□□ 0.24
USP8P40818 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
USP8P40818 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.54■□□□□ 0.24
USP8P40818 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.54■□□□□ 0.24
USP8P40818 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.54■□□□□ 0.24
USP8P40818 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.54■□□□□ 0.24
USP8P40818 AC023310.3-201ENST00000557027 670 ntBASIC16.54■□□□□ 0.24
USP8P40818 AC100756.1-201ENST00000562736 682 ntBASIC16.54■□□□□ 0.24
USP8P40818 AC138749.3-201ENST00000567691 622 ntBASIC16.54■□□□□ 0.24
USP8P40818 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
USP8P40818 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.54■□□□□ 0.24
USP8P40818 AC000095.1-201ENST00000603208 874 ntBASIC16.54■□□□□ 0.24
USP8P40818 AC116165.1-201ENST00000611806 668 ntBASIC16.54■□□□□ 0.24
USP8P40818 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.54■□□□□ 0.24
USP8P40818 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.54■□□□□ 0.24
USP8P40818 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.54■□□□□ 0.24
USP8P40818 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.54■□□□□ 0.24
USP8P40818 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP8P40818 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
USP8P40818 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
USP8P40818 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
USP8P40818 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.53■□□□□ 0.24
USP8P40818 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
USP8P40818 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.53■□□□□ 0.24
USP8P40818 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.53■□□□□ 0.24
USP8P40818 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 UGT1A2P-201ENST00000454886 866 ntBASIC16.53■□□□□ 0.24
USP8P40818 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.53■□□□□ 0.24
USP8P40818 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.53■□□□□ 0.24
USP8P40818 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.53■□□□□ 0.24
USP8P40818 AC036164.1-201ENST00000570544 333 ntBASIC16.53■□□□□ 0.24
USP8P40818 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.53■□□□□ 0.24
USP8P40818 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.53■□□□□ 0.24
USP8P40818 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
USP8P40818 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
USP8P40818 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.53■□□□□ 0.24
USP8P40818 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.53■□□□□ 0.24
USP8P40818 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.53■□□□□ 0.24
USP8P40818 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
USP8P40818 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
USP8P40818 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.53■□□□□ 0.24
USP8P40818 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
USP8P40818 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP8P40818 REXO1L4P-201ENST00000605109 1937 ntBASIC16.53■□□□□ 0.24
USP8P40818 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP8P40818 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP8P40818 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP8P40818 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms