Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN3P20807 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.59□□□□□ -0.07
CAPN3P20807 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN3P20807 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN3P20807 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CAPN3P20807 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN3P20807 AL589739.1-201ENST00000607720 493 ntBASIC14.59□□□□□ -0.07
CAPN3P20807 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN3P20807 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN3P20807 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.59□□□□□ -0.07
CAPN3P20807 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.59□□□□□ -0.07
CAPN3P20807 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.59□□□□□ -0.07
CAPN3P20807 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CAPN3P20807 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN3P20807 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.59□□□□□ -0.07
CAPN3P20807 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CAPN3P20807 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CAPN3P20807 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.58□□□□□ -0.07
CAPN3P20807 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CAPN3P20807 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CAPN3P20807 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CAPN3P20807 AL365209.1-201ENST00000624418 6473 ntBASIC14.58□□□□□ -0.07
CAPN3P20807 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CAPN3P20807 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CAPN3P20807 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.58□□□□□ -0.07
CAPN3P20807 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.58□□□□□ -0.07
CAPN3P20807 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CAPN3P20807 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN3P20807 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CAPN3P20807 AC245100.3-201ENST00000441281 285 ntBASIC14.58□□□□□ -0.08
CAPN3P20807 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN3P20807 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.58□□□□□ -0.08
CAPN3P20807 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN3P20807 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.58□□□□□ -0.08
CAPN3P20807 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.58□□□□□ -0.08
CAPN3P20807 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN3P20807 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN3P20807 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CAPN3P20807 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CAPN3P20807 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.58□□□□□ -0.08
CAPN3P20807 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.58□□□□□ -0.08
CAPN3P20807 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.58□□□□□ -0.08
CAPN3P20807 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CAPN3P20807 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CAPN3P20807 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.57□□□□□ -0.08
CAPN3P20807 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN3P20807 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CAPN3P20807 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.57□□□□□ -0.08
CAPN3P20807 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CAPN3P20807 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms