Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
KRT4P19013 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
KRT4P19013 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
KRT4P19013 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
KRT4P19013 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 MIR940-201ENST00000401276 94 ntBASIC15.2■□□□□ 0.02
KRT4P19013 TOMM22P5-201ENST00000416399 439 ntBASIC15.2■□□□□ 0.02
KRT4P19013 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
KRT4P19013 AC004832.2-201ENST00000426397 482 ntBASIC15.2■□□□□ 0.02
KRT4P19013 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT4P19013 SERBP1P3-201ENST00000459980 809 ntBASIC15.2■□□□□ 0.02
KRT4P19013 AC022447.6-201ENST00000515522 438 ntBASIC15.2■□□□□ 0.02
KRT4P19013 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT4P19013 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 AC026150.2-201ENST00000564693 1156 ntBASIC15.2■□□□□ 0.02
KRT4P19013 MIR4453-201ENST00000584019 89 ntBASIC15.2■□□□□ 0.02
KRT4P19013 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT4P19013 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT4P19013 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT4P19013 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT4P19013 AL589739.1-201ENST00000607720 493 ntBASIC15.2■□□□□ 0.02
KRT4P19013 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT4P19013 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 CICP17-201ENST00000418553 2377 ntBASIC15.2■□□□□ 0.02
KRT4P19013 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
KRT4P19013 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
KRT4P19013 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
KRT4P19013 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT4P19013 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT4P19013 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT4P19013 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT4P19013 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT4P19013 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
KRT4P19013 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.19■□□□□ 0.02
KRT4P19013 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 AL080243.2-201ENST00000418783 582 ntBASIC15.19■□□□□ 0.02
KRT4P19013 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 CEND1P1-201ENST00000451006 455 ntBASIC15.19■□□□□ 0.02
KRT4P19013 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.19■□□□□ 0.02
KRT4P19013 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.19■□□□□ 0.02
KRT4P19013 MTDHP5-201ENST00000598980 586 ntBASIC15.19■□□□□ 0.02
KRT4P19013 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT4P19013 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KRT4P19013 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT4P19013 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
KRT4P19013 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.19■□□□□ 0.02
KRT4P19013 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.19■□□□□ 0.02
KRT4P19013 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT4P19013 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
KRT4P19013 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRT4P19013 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.18■□□□□ 0.02
KRT4P19013 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms