Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.53■□□□□ 0.08
ERCC2P18074 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.53■□□□□ 0.08
ERCC2P18074 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.53■□□□□ 0.08
ERCC2P18074 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ERCC2P18074 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.53■□□□□ 0.08
ERCC2P18074 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ERCC2P18074 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC2P18074 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ERCC2P18074 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC2P18074 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ERCC2P18074 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.53■□□□□ 0.08
ERCC2P18074 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC2P18074 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.53■□□□□ 0.08
ERCC2P18074 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC2P18074 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ERCC2P18074 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
ERCC2P18074 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.52■□□□□ 0.08
ERCC2P18074 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ERCC2P18074 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 AC005229.1-201ENST00000392885 409 ntBASIC15.52■□□□□ 0.08
ERCC2P18074 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.52■□□□□ 0.08
ERCC2P18074 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.52■□□□□ 0.08
ERCC2P18074 BCRP2-202ENST00000447763 634 ntBASIC15.52■□□□□ 0.08
ERCC2P18074 FO681548.1-201ENST00000455617 1132 ntBASIC15.52■□□□□ 0.08
ERCC2P18074 BCRP6-201ENST00000510112 632 ntBASIC15.52■□□□□ 0.08
ERCC2P18074 BCRP7-201ENST00000511549 544 ntBASIC15.52■□□□□ 0.08
ERCC2P18074 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.52■□□□□ 0.08
ERCC2P18074 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.52■□□□□ 0.08
ERCC2P18074 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.52■□□□□ 0.08
ERCC2P18074 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.52■□□□□ 0.08
ERCC2P18074 GNRHR2-203ENST00000581100 1187 ntBASIC15.52■□□□□ 0.08
ERCC2P18074 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC2P18074 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC2P18074 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC2P18074 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.52■□□□□ 0.07
ERCC2P18074 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.52■□□□□ 0.07
ERCC2P18074 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC2P18074 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.52■□□□□ 0.07
ERCC2P18074 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC2P18074 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC2P18074 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC2P18074 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ERCC2P18074 AL513477.1-201ENST00000602865 2407 ntBASIC15.52■□□□□ 0.07
ERCC2P18074 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC2P18074 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 LINC00552-201ENST00000625151 2579 ntBASIC15.51■□□□□ 0.07
ERCC2P18074 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
ERCC2P18074 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
ERCC2P18074 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ERCC2P18074 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
ERCC2P18074 AC092933.1-201ENST00000393644 945 ntBASIC15.51■□□□□ 0.07
ERCC2P18074 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
ERCC2P18074 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
ERCC2P18074 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.51■□□□□ 0.07
ERCC2P18074 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.51■□□□□ 0.07
ERCC2P18074 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC2P18074 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.51■□□□□ 0.07
ERCC2P18074 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.51■□□□□ 0.07
ERCC2P18074 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC2P18074 BTNL10-201ENST00000595971 695 ntBASIC15.51■□□□□ 0.07
ERCC2P18074 AC233724.13-201ENST00000598383 410 ntBASIC15.51■□□□□ 0.07
ERCC2P18074 AC012645.4-201ENST00000610691 1061 ntBASIC15.51■□□□□ 0.07
ERCC2P18074 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms