Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.31■□□□□ 0.04
XIRP2A4UGR9 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.31■□□□□ 0.04
XIRP2A4UGR9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.31■□□□□ 0.04
XIRP2A4UGR9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
XIRP2A4UGR9 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.31■□□□□ 0.04
XIRP2A4UGR9 AC133540.1-201ENST00000620845 1019 ntBASIC15.31■□□□□ 0.04
XIRP2A4UGR9 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC15.31■□□□□ 0.04
XIRP2A4UGR9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
XIRP2A4UGR9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
XIRP2A4UGR9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
XIRP2A4UGR9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 AC023906.1-201ENST00000486386 453 ntBASIC15.3■□□□□ 0.04
XIRP2A4UGR9 HERC2P11-201ENST00000562845 725 ntBASIC15.3■□□□□ 0.04
XIRP2A4UGR9 AC100756.2-201ENST00000569537 736 ntBASIC15.3■□□□□ 0.04
XIRP2A4UGR9 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 WASH7P-201ENST00000488147 1351 ntBASIC15.3■□□□□ 0.04
XIRP2A4UGR9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.3■□□□□ 0.04
XIRP2A4UGR9 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.3■□□□□ 0.04
XIRP2A4UGR9 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 MTHFR-217ENST00000641820 1569 ntBASIC15.3■□□□□ 0.04
XIRP2A4UGR9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 DPY19L2P5-201ENST00000456300 331 ntBASIC15.3■□□□□ 0.04
XIRP2A4UGR9 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 AC113347.2-201ENST00000512350 279 ntBASIC15.3■□□□□ 0.04
XIRP2A4UGR9 AC092612.1-201ENST00000514501 998 ntBASIC15.3■□□□□ 0.04
XIRP2A4UGR9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.3■□□□□ 0.04
XIRP2A4UGR9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 FAM86B3P-203ENST00000523992 854 ntBASIC15.29■□□□□ 0.04
XIRP2A4UGR9 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 AC092862.1-201ENST00000541534 533 ntBASIC15.29■□□□□ 0.04
XIRP2A4UGR9 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
XIRP2A4UGR9 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms