Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 AC055717.3-201ENST00000622967 595 ntBASIC13.86□□□□□ -0.19
CLN6Q9NWW5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 AL133267.1-201ENST00000398220 340 ntBASIC13.85□□□□□ -0.19
CLN6Q9NWW5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 AC025181.2-201ENST00000606994 802 ntBASIC13.85□□□□□ -0.19
CLN6Q9NWW5 BX640515.1-201ENST00000617215 977 ntBASIC13.85□□□□□ -0.19
CLN6Q9NWW5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.85□□□□□ -0.19
CLN6Q9NWW5 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.85□□□□□ -0.19
CLN6Q9NWW5 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 AC023090.2-201ENST00000625182 2110 ntBASIC13.84□□□□□ -0.19
CLN6Q9NWW5 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLN6Q9NWW5 YBX2P1-201ENST00000394192 760 ntBASIC13.84□□□□□ -0.19
CLN6Q9NWW5 AC023274.1-201ENST00000418278 595 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms