Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 AC013355.1-201ENST00000562625 723 ntBASIC17.59■□□□□ 0.41
EFCC1Q9HA90 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 ZACNP1-201ENST00000612259 710 ntBASIC17.59■□□□□ 0.41
EFCC1Q9HA90 AC022748.3-201ENST00000621828 275 ntBASIC17.59■□□□□ 0.41
EFCC1Q9HA90 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 TNRC18P2-201ENST00000417666 2714 ntBASIC17.59■□□□□ 0.41
EFCC1Q9HA90 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EFCC1Q9HA90 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.58■□□□□ 0.41
EFCC1Q9HA90 AC069224.1-201ENST00000566372 1715 ntBASIC17.58■□□□□ 0.41
EFCC1Q9HA90 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.58■□□□□ 0.41
EFCC1Q9HA90 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
EFCC1Q9HA90 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
EFCC1Q9HA90 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EFCC1Q9HA90 KRT8P4-201ENST00000509735 1454 ntBASIC17.58■□□□□ 0.41
EFCC1Q9HA90 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 AL139094.1-201ENST00000405549 1188 ntBASIC17.58■□□□□ 0.4
EFCC1Q9HA90 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 AC006335.1-201ENST00000445200 547 ntBASIC17.58■□□□□ 0.4
EFCC1Q9HA90 NOC2LP1-201ENST00000450578 752 ntBASIC17.58■□□□□ 0.4
EFCC1Q9HA90 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 AL353770.1-201ENST00000614915 403 ntBASIC17.58■□□□□ 0.4
EFCC1Q9HA90 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 SNX18-202ENST00000343017 3140 ntBASIC17.58■□□□□ 0.4
EFCC1Q9HA90 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.58■□□□□ 0.4
EFCC1Q9HA90 AC007787.1-201ENST00000588095 1583 ntBASIC17.57■□□□□ 0.4
EFCC1Q9HA90 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 AL365203.3-201ENST00000609742 2057 ntBASIC17.57■□□□□ 0.4
EFCC1Q9HA90 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 FGFR3P1-201ENST00000449999 601 ntBASIC17.57■□□□□ 0.4
EFCC1Q9HA90 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 AC019193.1-201ENST00000506678 823 ntBASIC17.57■□□□□ 0.4
EFCC1Q9HA90 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 NPM1P43-201ENST00000558669 786 ntBASIC17.57■□□□□ 0.4
EFCC1Q9HA90 AC135983.4-201ENST00000564116 1262 ntBASIC17.57■□□□□ 0.4
EFCC1Q9HA90 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 AL158070.2-201ENST00000623713 1621 ntBASIC17.57■□□□□ 0.4
EFCC1Q9HA90 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms