Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HDHD3Q9BSH5 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 SDHAP3-202ENST00000515467 728 ntBASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 AC000095.1-201ENST00000603208 874 ntBASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 AL596442.2-201ENST00000610240 980 ntBASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 AC073592.8-201ENST00000624126 511 ntBASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 Z92544.3-201ENST00000624747 417 ntBASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.79□□□□□ -0.36
HDHD3Q9BSH5 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms