Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.14□□□□□ -0.47
RNF2Q99496 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF2Q99496 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.13□□□□□ -0.47
RNF2Q99496 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
RNF2Q99496 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
RNF2Q99496 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.13□□□□□ -0.47
RNF2Q99496 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RNF2Q99496 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF2Q99496 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.13□□□□□ -0.47
RNF2Q99496 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.13□□□□□ -0.47
RNF2Q99496 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF2Q99496 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF2Q99496 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.13□□□□□ -0.47
RNF2Q99496 CNN2P2-201ENST00000443536 909 ntBASIC12.13□□□□□ -0.47
RNF2Q99496 CNN2P3-201ENST00000450201 906 ntBASIC12.13□□□□□ -0.47
RNF2Q99496 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.13□□□□□ -0.47
RNF2Q99496 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.13□□□□□ -0.47
RNF2Q99496 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF2Q99496 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
RNF2Q99496 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 GPALPP1-207ENST00000611650 899 ntBASIC12.13□□□□□ -0.47
RNF2Q99496 AL136317.3-201ENST00000618497 906 ntBASIC12.13□□□□□ -0.47
RNF2Q99496 Z92544.3-201ENST00000624747 417 ntBASIC12.13□□□□□ -0.47
RNF2Q99496 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RNF2Q99496 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
RNF2Q99496 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF2Q99496 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF2Q99496 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.13□□□□□ -0.47
RNF2Q99496 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.13□□□□□ -0.47
RNF2Q99496 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
RNF2Q99496 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.13□□□□□ -0.47
RNF2Q99496 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RNF2Q99496 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RNF2Q99496 AL731571.1-201ENST00000617058 5428 ntBASIC12.12□□□□□ -0.47
RNF2Q99496 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 KRT18P28-201ENST00000453838 1332 ntBASIC12.12□□□□□ -0.47
RNF2Q99496 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RNF2Q99496 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RNF2Q99496 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
RNF2Q99496 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.12□□□□□ -0.47
RNF2Q99496 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.12□□□□□ -0.47
RNF2Q99496 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
RNF2Q99496 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
RNF2Q99496 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.12□□□□□ -0.47
RNF2Q99496 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.12□□□□□ -0.47
RNF2Q99496 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 METTL21AP1-201ENST00000438852 635 ntBASIC12.12□□□□□ -0.47
RNF2Q99496 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.12□□□□□ -0.47
RNF2Q99496 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.12□□□□□ -0.47
RNF2Q99496 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.12□□□□□ -0.47
RNF2Q99496 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.12□□□□□ -0.47
RNF2Q99496 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RNF2Q99496 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.12□□□□□ -0.47
RNF2Q99496 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms