Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.39□□□□□ -0.11
BBS4Q96RK4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BBS4Q96RK4 AC093525.8-201ENST00000624099 1342 ntBASIC14.39□□□□□ -0.11
BBS4Q96RK4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 AL157414.3-201ENST00000624276 1954 ntBASIC14.38□□□□□ -0.11
BBS4Q96RK4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 C1QBPP1-201ENST00000400117 770 ntBASIC14.38□□□□□ -0.11
BBS4Q96RK4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 NUS1P3-201ENST00000423502 862 ntBASIC14.38□□□□□ -0.11
BBS4Q96RK4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 MIR8072-201ENST00000614241 80 ntBASIC14.38□□□□□ -0.11
BBS4Q96RK4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BBS4Q96RK4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
BBS4Q96RK4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 REXO1L5P-201ENST00000622260 2098 ntBASIC14.37□□□□□ -0.11
BBS4Q96RK4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BBS4Q96RK4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BBS4Q96RK4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms