Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AL645937.2-201ENST00000396808 931 ntBASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AC109322.1-201ENST00000524499 1264 ntBASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AC016397.2-201ENST00000624848 1985 ntBASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 KRT8P14-201ENST00000414254 1442 ntBASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 AC097376.2-205ENST00000610159 5334 ntBASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 AC114501.2-201ENST00000439631 535 ntBASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 AP006288.1-201ENST00000446065 395 ntBASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 DRD5P1-201ENST00000456605 1438 ntBASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC44A1Q8WWI5 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.02
SLC44A1Q8WWI5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 CLK3P2-201ENST00000427566 1453 ntBASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SLC44A1Q8WWI5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms