Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 AC069262.1-201ENST00000539058 672 ntBASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 AC015910.1-201ENST00000579400 975 ntBASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 RN7SL828P-201ENST00000607615 303 ntBASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 AL136317.3-201ENST00000618497 906 ntBASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.26□□□□□ -0.13
PIK3C3Q8NEB9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 AC012508.2-201ENST00000567613 1472 ntBASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 AC015802.1-201ENST00000588104 1449 ntBASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PIK3C3Q8NEB9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 SLED1-202ENST00000512051 380 ntBASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PIK3C3Q8NEB9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms