Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZIC4Q8N9L1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 AC106881.1-201ENST00000605849 3329 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 TLE1P1-201ENST00000422965 589 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 AC007969.1-201ENST00000433675 447 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 FTLP10-202ENST00000505798 471 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 AL391280.1-201ENST00000506969 1062 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 AP003171.2-201ENST00000528208 925 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 HILS1-202ENST00000545329 423 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 AC138696.2-201ENST00000607376 223 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 MIR6775-201ENST00000617557 69 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 MTHFR-210ENST00000641407 2387 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 FKBP4P6-201ENST00000457486 1332 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 SALL4P5-201ENST00000419001 1760 ntBASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZIC4Q8N9L1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 FLJ16779-201ENST00000612722 7638 ntBASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 AC234783.1-201ENST00000441761 496 ntBASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 KLF2P4-201ENST00000451959 1225 ntBASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 CTBP2P5-201ENST00000454986 1264 ntBASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 AC138951.2-201ENST00000623455 1161 ntBASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 RHOXF1P1-202ENST00000635473 501 ntBASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZIC4Q8N9L1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms