Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 AL603832.2-201ENST00000566195 2125 ntBASIC18.55■□□□□ 0.56
COL23A1Q86Y22 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 AC244197.1-201ENST00000456494 951 ntBASIC18.54■□□□□ 0.56
COL23A1Q86Y22 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 RN7SL357P-201ENST00000581065 298 ntBASIC18.54■□□□□ 0.56
COL23A1Q86Y22 HMGB1P24-201ENST00000611897 328 ntBASIC18.54■□□□□ 0.56
COL23A1Q86Y22 MME-218ENST00000625667 363 ntTSL 5 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.54■□□□□ 0.56
COL23A1Q86Y22 LILRP1-201ENST00000444199 1370 ntBASIC18.54■□□□□ 0.56
COL23A1Q86Y22 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 PCDHB19P-201ENST00000570871 2371 ntBASIC18.53■□□□□ 0.56
COL23A1Q86Y22 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 RN7SL494P-201ENST00000461517 304 ntBASIC18.53■□□□□ 0.56
COL23A1Q86Y22 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 MIR2392-201ENST00000584881 84 ntBASIC18.53■□□□□ 0.56
COL23A1Q86Y22 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 AC140113.1-201ENST00000603467 169 ntBASIC18.53■□□□□ 0.56
COL23A1Q86Y22 AL139339.2-201ENST00000608063 657 ntBASIC18.53■□□□□ 0.56
COL23A1Q86Y22 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL23A1Q86Y22 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 OR6D1P-202ENST00000641007 5290 ntBASIC18.52■□□□□ 0.56
COL23A1Q86Y22 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 AL672207.1-201ENST00000328462 1570 ntBASIC18.52■□□□□ 0.56
COL23A1Q86Y22 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 AC006548.2-201ENST00000605217 529 ntBASIC18.52■□□□□ 0.56
COL23A1Q86Y22 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
COL23A1Q86Y22 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL23A1Q86Y22 AC024909.3-201ENST00000611513 2257 ntBASIC18.52■□□□□ 0.55
COL23A1Q86Y22 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.52■□□□□ 0.55
COL23A1Q86Y22 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.52■□□□□ 0.55
COL23A1Q86Y22 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms