Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.39■□□□□ 0.05
CROCCP2Q86T23 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP2Q86T23 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP2Q86T23 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP2Q86T23 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CROCCP2Q86T23 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 AC131212.3-201ENST00000624087 4219 ntBASIC15.38■□□□□ 0.05
CROCCP2Q86T23 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 LINC01225-203ENST00000563550 1244 ntBASIC15.38■□□□□ 0.05
CROCCP2Q86T23 AL049840.3-201ENST00000602669 611 ntBASIC15.38■□□□□ 0.05
CROCCP2Q86T23 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 AC084121.4-201ENST00000641598 221 ntBASIC15.38■□□□□ 0.05
CROCCP2Q86T23 AF228730.8-201ENST00000642140 221 ntBASIC15.38■□□□□ 0.05
CROCCP2Q86T23 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP2Q86T23 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 KRT18P43-201ENST00000469825 1281 ntBASIC15.37■□□□□ 0.05
CROCCP2Q86T23 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.37■□□□□ 0.05
CROCCP2Q86T23 AC105021.1-202ENST00000570572 669 ntBASIC15.37■□□□□ 0.05
CROCCP2Q86T23 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 AL731571.1-201ENST00000617058 5428 ntBASIC15.37■□□□□ 0.05
CROCCP2Q86T23 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 AC073548.1-201ENST00000624088 1882 ntBASIC15.37■□□□□ 0.05
CROCCP2Q86T23 CICP8-201ENST00000455800 2813 ntBASIC15.37■□□□□ 0.05
CROCCP2Q86T23 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms