Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASC4Q6P4E1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 KRT18P28-201ENST00000453838 1332 ntBASIC15.49■□□□□ 0.07
CASC4Q6P4E1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 AC114501.2-201ENST00000439631 535 ntBASIC15.49■□□□□ 0.07
CASC4Q6P4E1 MEIS3P1-201ENST00000495167 958 ntBASIC15.49■□□□□ 0.07
CASC4Q6P4E1 AC004066.1-201ENST00000502488 802 ntBASIC15.49■□□□□ 0.07
CASC4Q6P4E1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 AL158212.4-201ENST00000624062 1286 ntBASIC15.49■□□□□ 0.07
CASC4Q6P4E1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.49■□□□□ 0.07
CASC4Q6P4E1 LILRP1-201ENST00000444199 1370 ntBASIC15.49■□□□□ 0.07
CASC4Q6P4E1 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 AC092337.1-201ENST00000568699 1129 ntBASIC15.48■□□□□ 0.07
CASC4Q6P4E1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 PEG13-201ENST00000631594 5667 ntBASIC15.48■□□□□ 0.07
CASC4Q6P4E1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASC4Q6P4E1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CASC4Q6P4E1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms