Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RFTN2Q52LD8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 AL138799.1-201ENST00000448213 1675 ntBASIC14.56□□□□□ -0.08
RFTN2Q52LD8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 FAM86LP-201ENST00000478302 853 ntBASIC14.56□□□□□ -0.08
RFTN2Q52LD8 AC026410.3-201ENST00000514280 936 ntBASIC14.56□□□□□ -0.08
RFTN2Q52LD8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 KRT18P28-201ENST00000453838 1332 ntBASIC14.56□□□□□ -0.08
RFTN2Q52LD8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RFTN2Q52LD8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 AC055876.3-201ENST00000431496 288 ntBASIC14.55□□□□□ -0.08
RFTN2Q52LD8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 RARRES2P5-201ENST00000564013 466 ntBASIC14.55□□□□□ -0.08
RFTN2Q52LD8 AC107373.2-201ENST00000607735 490 ntBASIC14.55□□□□□ -0.08
RFTN2Q52LD8 AC138649.4-201ENST00000612222 287 ntBASIC14.55□□□□□ -0.08
RFTN2Q52LD8 AC004790.1-201ENST00000612686 536 ntBASIC14.55□□□□□ -0.08
RFTN2Q52LD8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 AC018665.1-201ENST00000622927 1362 ntBASIC14.55□□□□□ -0.08
RFTN2Q52LD8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 AC015802.1-201ENST00000588104 1449 ntBASIC14.55□□□□□ -0.08
RFTN2Q52LD8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RFTN2Q52LD8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms