Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 MIR4706-201ENST00000582134 82 ntBASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 AC008805.1-201ENST00000590892 364 ntBASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 AL008718.2-201ENST00000609206 1313 ntBASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.45■□□□□ 0.38
SHROOM1Q2M3G4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 PUDPP3-201ENST00000445368 636 ntBASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 MIR3907-201ENST00000579424 151 ntBASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM1Q2M3G4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 HINT2P1-201ENST00000419438 481 ntBASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 ISCA2P1-201ENST00000425548 448 ntBASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 AL596276.2-201ENST00000447525 331 ntBASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 AL133466.1-201ENST00000447582 150 ntBASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 AC009779.1-201ENST00000551138 283 ntBASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 CICP6-201ENST00000457191 2729 ntBASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SHROOM1Q2M3G4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms